Molecular Microbial Ecology (MME)

Publications

DeSantis, T. Z., Dubosarskiy, I., and Andersen, G. L., (2003) Comprehensive aligned sequence construction for automated design of effective probes (CASCADE-P) using 16S rDNA. Bioinformatics 19: 1461-1468

Radnedge, L., Agron, P. G., Hill, K. H., Jackson, P. J., Ticknor, L. O., Keim, P, and Andersen, G. L., (2003) Genome differences that distinguish Bacillus anthracis from Bacillus cereus and Bacillus thuringiensis. Appl. Env. Micro. 69:2755-2764.

Agron, P. G., Sobecky, P., and Andersen, G. L., (2002) Establishment of uncharacterized plasmids in Escherichia coli by in vitro transposition. FEMS Microbiology Letters 217: 249-254.

Agron, P. G., Macht, M., Radnedge, L., Skowronski, E. W., Miller, W., and Andersen, G. L. (2002) Use of subtractive hybridization to survey comprehensively prokaryotic genomic differences. FEMS Microbiology Letters 211: 175-182.

Radnedge, L., Agron, P. G., Worsham, P. L., and Andersen, G. L. (2002) Genome plasticity in Yersinia pestis. Microbiology 148: 1687-1698.

Wilson, K. H., Wilson, W. J., Radosevich, J. L., DeSantis, T. Z., Viswanathan, V. S., Kuczmarski, T. A., and Andersen, G. L. (2002) High density microarray of small subunit ribosomal DNA probes. Appl. Env. Micro. 68: (5) 2535-2541.

Wilson, W. J., Strout, C. L., DeSantis, T. Z., Stilwell, J. L., Carrano, A. V., and Andersen, G. L. (2002) Sequence specific identification of 18 pathogenic microorganisms using microarray technology. Molecular and Cellular Probes 16: (2) 119-127.

Radosevich, J. L., Wilson, W. J., Shinn, J. H., DeSantis, T. Z., and Andersen, G. L. (2002) Development of a high-volume aerosol collection system for the identification of airborne microorganisms. Letters in Applied Microbiology 34: (3) 162-167.

Radnedge, L., Gamez-Chin, S., McCready, P. M., Worsham, P. L. and Andersen, G. L. (2001) Identification of nucleotide sequences for the specific and rapid detection of Yersinia pestis. Appl. Env. Micro. 67: (8) 3759-3762

Agron, P. G., Walker, R. L., Kinde, H., Sawyer, S. J., Hayes, D. C., Wollard, J., and Andersen, G. L. (2001) Identification by subtractive hybridization of sequences specific for Salmonella enterica serovar Enteritidis. Appl. Env. Micro. 67: (11) 4984-4991

Skowronski, E. W.; Armstrong, N, Andersen, G. L., Macht, M., and McCready, P. M. (2000) Magnetic, microplate-format plasmid isolation protocol for high-yield, sequencing-grade DNA. Biotechniques 29: 786-792.

Bogush, M. L., Velikodvorskaya, T. V., Lebedev, Y. B., Nikolaev, L. G., Lukyanov, S. A., Fradkov, A. F., Pliyev, B. K., Boichenko, M. N., Usatova, G. N., Vorobiev, A. A., Andersen, G. L., and Sverdlov E. D. (1999) Identification and localization of differences between Escherichia coli and Salmonella typhimurium genomes with the use of suppressive subtractive hybridization. Molecular and General Genetics 262: 721-729

Andersen, G. L., Beattie, G. A., and Lindow, S. E., (1998) Molecular characterization and sequence of a methionine biosynthetic locus from Pseudomonas syringae Journal of Bacteriology 180: 4497-4507.

Andersen, G., Simchock, J., and Wilson, K. (1996). Identification of a region of genetic variability among Bacillus anthracis strains and related species. Journal of Bacteriology 178: 377-384.

Lindow, S., and Andersen, G. (1996). Influence of immigration on epiphytic bacterial populations on navel orange leaves. Applied Environmental Microbiology 62: 2978-2987.

Harrell, L., Andersen. G., and Wilson, K. (1995). Genetic variability of Bacillus anthracis and related species. Journal of Clinical Microbiology 33: 1847-1850.

Lindow, S., Andersen, G., and Beattie, G. (1993). Characteristics of insertional mutants of Pseudomonas syringae with reduced epiphytic fitness. Applied Environmental Microbiology 59:1593-1601.